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Series GSE112782 Query DataSets for GSE112782
Status Public on Oct 16, 2019
Title The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells [CLIP-Seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Other
Summary Analysis of human embryonic stem cells and induced pluripotent stem cells depleted for DDX6. Results provide insight into the regulation of human stem cell self-renewal and differentiation by the RNA-binding protein DDX6
 
Overall design CLIP-seq
 
Contributor(s) Di Stefano B, Luo E, Aigner S, Hochedlinger K
Citation(s) 31588046
Submission date Apr 05, 2018
Last update date Oct 20, 2019
Contact name En-Ching Luo
Organization name UCSD
Street address 9500 Gilman St
City La Jolla
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (10)
GSM3083443 GEN1C-eCLIP-DDX6-1-Input
GSM3083444 GEN1C-eCLIP-DDX6-2-Input
GSM3083445 GEN1C-eCLIP-DDX6-1-IP
This SubSeries is part of SuperSeries:
GSE112479 The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells
Relations
BioProject PRJNA448944
SRA SRP137771

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE112782_RAW.tar 480.7 Mb (http)(custom) TAR (of BB, BED, BW, CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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