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Series GSE112805 Query DataSets for GSE112805
Status Public on Mar 29, 2019
Title Clever-1 controls site-specific interactions between vasculature and lymphocytes in mouse and human spleen
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study is to compare gene expression differences between WT and Stab1-/- spleen endothelial cells for the identification of biological processes regulated by Stab1 expression.
Overall design Transcriptome profiles of spleen endothelial cells of wild type (WT) and stab1-/- mice were generated by NGS, in triplicate, using Illumina Hiseq3000
Contributor(s) Takeda A, Hollmén M, Jalkanen S
Citation(s) 30926591
Submission date Apr 06, 2018
Last update date May 26, 2019
Contact name Akira Takeda
Organization name University of Turku
Department Institute of Biomedicine
Street address Tykistökatu 6A
City Turku
State/province South-West Finland
ZIP/Postal code 20520
Country Finland
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (6)
GSM3084063 WT rep1
GSM3084064 WT rep2
GSM3084065 WT rep3
BioProject PRJNA449062
SRA SRP137820

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE112805_NormalizedData.txt.gz 1.7 Mb (ftp)(http) TXT
GSE112805_comparisonData_KO_VS_WT.txt.gz 1.3 Mb (ftp)(http) TXT
GSE112805_downRegulated_KO_VS_WT.txt.gz 12.0 Kb (ftp)(http) TXT
GSE112805_upRegulated_KO_VS_WT.txt.gz 3.7 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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