NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE114422 Query DataSets for GSE114422
Status Public on Jun 14, 2018
Title Paternal malnutrition programs offspring’s breast cancer risk and tumor metabolism in a mouse model (MBD-seq)
Organism Mus musculus
Experiment type Methylation profiling by high throughput sequencing
Summary We found that LP daughters have lower birthweight, alterations in mammary gland morphology and higher rates of mammary cancer. Further, we found that mammary glands and tumors of LP daughters are metabolic rewired, with alterations in the AMPK and amino-acid metabolism pathways. These changes were associated with differential expression of miRNAs 451a, miR-200c and miR-92a. Importantly, some of the same miRNAs and target genes alterations were detected in breast tumors of women from populations with high rates of low birthweight.
 
Overall design Male mice were fed AIN93G-based diets containing either 17.7% (control) or 8.9% (LP) energy from protein from 3 to 10 weeks of age. Males on either group were mated to females raised on a control diet. Female offspring control and LP fathers were treated with 7,12-dimethylbenz[a]anthracene (DMBA) to initiate mammary carcinogenesis. Mature sperm from fathers and mammary tissue from female offspring were used for DNA methylation analyses.
 
Contributor(s) Santana R, Carney EJ, Clarke J, Cao H, Cruz MI, Benitez C, Jin L, Fu Y, Cheng Z, Wang Y, de Assis S
Citation(s) 30165877
Submission date May 14, 2018
Last update date Nov 01, 2018
Contact name Lu Jin
E-mail(s) lj74@georgetown.edu
Organization name Georgetown University
Department Oncology
Lab NRB Room W405B
Street address 3970 Reservoir Rd NW
City Washington
State/province D.C.
ZIP/Postal code 20057
Country USA
 
Platforms (1)
GPL9250 Illumina Genome Analyzer II (Mus musculus)
Samples (11)
GSM3141502 MG_CO_Rep1
GSM3141503 MG_CO_Rep2
GSM3141504 MG_CO_Rep3
This SubSeries is part of SuperSeries:
GSE114423 Paternal malnutrition programs offspring’s breast cancer risk and tumor metabolism in a mouse model
Relations
BioProject PRJNA471326
SRA SRP145631

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE114422_MG_CO_Methy.txt.gz 3.0 Kb (ftp)(http) TXT
GSE114422_MG_LP_Methy.txt.gz 2.9 Kb (ftp)(http) TXT
GSE114422_SPR_CO_Methy.txt.gz 8.3 Kb (ftp)(http) TXT
GSE114422_SPR_LP_Methy.txt.gz 7.3 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap