|
| Status |
Public on Jun 01, 2020 |
| Title |
Organoids derived from pancreatic adenocarcinoma patients share morphological and genetic features with the primary tumor [RNA-seq] |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA sequencing demonstrates molecular profiles common to primary tumor, PDX and organoid models
|
| |
|
| Overall design |
RNAseq of 7 patient tumors and their models, consisting of 7 tumors, 4 PDX, 5 cell line, 4 organoid, and 6 normal for a total of 25 samples.
|
| |
|
| Contributor(s) |
Calvo IR, Brown M, Kirby K, Sparrow S |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
May 15, 2018 |
| Last update date |
Jun 03, 2020 |
| Contact name |
Miguel Brown |
| E-mail(s) |
miguel.a.brown@gmail.com
|
| Organization name |
The Rockefeller University
|
| Street address |
1230 York Ave Box 186
|
| City |
New York |
| State/province |
New York |
| ZIP/Postal code |
10065 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
| GPL20301 |
Illumina HiSeq 4000 (Homo sapiens) |
|
| Samples (25)
|
|
| This SubSeries is part of SuperSeries: |
| GSE114455 |
Organoids derived from pancreatic adenocarcinoma patients share morphological and genetic features with the primary tumor |
|
| Relations |
| BioProject |
PRJNA471423 |
| SRA |
SRP145863 |
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