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GEO accession:
Series GSE114849
Query DataSets for GSE114849
Status
Public on May 01, 2020
Title
DNA methylation and mirRNA/mRNA Expression data from Human Mammary Epithelial Cells (HMECs) transduced with shp53, HRASV12, WNT1 and CCNE1
Platform organisms
Homo sapiens
;
synthetic construct
Sample organism
Homo sapiens
Experiment type
Methylation profiling by high throughput sequencing
Non-coding RNA profiling by array
Expression profiling by array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
May 23, 2018
Last update date
May 02, 2020
Contact name
stanislas P du manoir
E-mail(s)
stanislas.dumanoir@inserm.fr
Organization name
IRCM
Lab
Genetic and phenotypic plasticity of cancer team
Street address
280 rue des apothicaires
City
montpellier
ZIP/Postal code
34298
Country
France
Platforms (3)
GPL6244
[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
GPL8786
[miRNA-1] Affymetrix Multispecies miRNA-1 Array
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
Samples (54)
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GSM3150564
RRBS_R2_replicate1
GSM3150565
RRBS_R2_replicate2
GSM3150566
RRBS_R2shP53_Early_replicate1
GSM3150567
RRBS_R2shP53_Early_replicate2
GSM3150568
RRBS_R2shP53_Late_replicate1
GSM3150569
RRBS_R2shP53_Late_replicate2
GSM3150570
RRBS_R2shp53-CCNE1_Late_replicate1
GSM3150571
RRBS_R2shp53-CCNE1_Late_replicate2
GSM3150572
RRBS_R2shp53-CCNE1_SA_replicate1
GSM3150573
RRBS_R2shp53-CCNE1_SA_replicate2
GSM3150574
RRBS_R2shp53-RASV12_Late_replicate1
GSM3150575
RRBS_R2shp53-RASV12_Late_replicate2
GSM3150576
RRBS_R2shp53-RASV12_SA_replicate1
GSM3150577
RRBS_R2shp53-RASV12_SA_replicate2
GSM3150578
RRBS_R2shp53-WNT1_Late_replicate1
GSM3150579
RRBS_R2shp53-WNT1_Late_replicate2
GSM3150580
RRBS_R2shp53-WNT1_SA_replicate1
GSM3150581
RRBS_R2shp53-WNT1_SA_replicate2
GSM3151385
R2_replicate1 [miRNA]
GSM3151386
R2_replicate2 [miRNA]
GSM3151387
R2shP53_Early_replicate1 [miRNA]
GSM3151388
R2shP53_Late_replicate1 [miRNA]
GSM3151389
R2shP53_Early_replicate2 [miRNA]
GSM3151390
R2shP53_Late_replicate2 [miRNA]
GSM3151391
R2shp53-CCNE1_Late_replicate1 [miRNA]
GSM3151392
R2shp53-CCNE1_Late_replicate2 [miRNA]
GSM3151393
R2shp53-CCNE1_SA_replicate1 [miRNA]
GSM3151394
R2shp53-CCNE1_SA_replicate2 [miRNA]
GSM3151395
R2shp53-RASV12_Late_replicate1 [miRNA]
GSM3151396
R2shp53-RASV12_Late_replicate2 [miRNA]
GSM3151397
R2shp53-RASV12_SA_replicate1 [miRNA]
GSM3151398
R2shp53-RASV12_SA_replicate2 [miRNA]
GSM3151399
R2shp53-WNT1_Late_replicate1 [miRNA]
GSM3151400
R2shp53-WNT1_Late_replicate2 [miRNA]
GSM3151401
R2shp53-WNT1_SA_replicate1 [miRNA]
GSM3151402
R2shp53-WNT1_SA_replicate2 [miRNA]
GSM3151650
R2_replicate1
GSM3151651
R2_replicate2
GSM3151652
R2shP53_Early_replicate1
GSM3151653
R2shP53_Late_replicate1
GSM3151654
R2shP53_Early_replicate2
GSM3151655
R2shP53_Late_replicate2
GSM3151656
R2shp53-CCNE1_Late_replicate1
GSM3151657
R2shp53-CCNE1_Late_replicate2
GSM3151658
R2shp53-CCNE1_SA_replicate1
GSM3151659
R2shp53-CCNE1_SA_replicate2
GSM3151660
R2shp53-RASV12_Late_replicate1
GSM3151661
R2shp53-RASV12_Late_replicate2
GSM3151662
R2shp53-RASV12_SA_replicate1
GSM3151663
R2shp53-RASV12_SA_replicate2
GSM3151664
R2shp53-WNT1_Late_replicate1
GSM3151665
R2shp53-WNT1_Late_replicate2
GSM3151666
R2shp53-WNT1_SA_replicate1
GSM3151667
R2shp53-WNT1_SA_replicate2
This SuperSeries is composed of the following SubSeries:
GSE114807
DNA methylation data from Human Mammary Epithelial Cells (HMECs) transduced with shp53, HRASV12, WNT1 and CCNE1 [RRBS-seq]
GSE114839
mirRNA Expression data from Human Mammary Epithelial Cells (HMECs) transduced with shp53, HRASV12, WNT1 and CCNE1 [miRNA expression]
GSE114848
mRNA Expression data from Human Mammary Epithelial Cells (HMECs) transduced with shp53, HRASV12, WNT1 and CCNE1 [mRNA expression]
Relations
BioProject
PRJNA472823
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GSE114849_RAW.tar
384.6 Mb
(http)
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