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Series GSE115025 Query DataSets for GSE115025
Status Public on Jul 02, 2018
Title Transcriptional profile of monocytes in the colon in response to C. rodentium infection
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Transcriptional profile of monocytes in the colon in response to C. rodentium infection
 
Overall design Eight samples have been analyzed. All are from Cd11b+Ly6C+ inflammatory monocytes sorted from colonic tissue 9 days after C. rodentium infection from Atg16L1HM(4) and WT(4) mice.
 
Contributor(s) Cadwell K, Marton P, Rudensky E
Citation(s) 30202015
Submission date May 29, 2018
Last update date May 17, 2019
Contact name Patricia K Martin
E-mail(s) patricia.kimimila@gmail.com
Phone 7079724714
Organization name NYU School of Medicine
Department Pathology
Lab Cadwell
Street address 564 1st Ave, 12E
City New York
State/province NY
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (8)
GSM3163172 WT #1
GSM3163173 HM #2
GSM3163174 WT #3
Relations
BioProject PRJNA473531
SRA SRP149190

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE115025_Table_S1.xlsx 179.7 Kb (ftp)(http) XLSX
GSE115025_gene_list_geo_.xlsx 347.8 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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