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Series GSE115896 Query DataSets for GSE115896
Status Public on Aug 04, 2019
Title Dynamic 3D chromosomal landscapes in acute leukemia
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 32203470
Andreas Kloetgen, Palaniraja Thandapani, Panagiotis Ntziachristos, et al. Dynamic 3D chromosomal landscapes in acute leukemia. bioRxiv 2019. doi:10.1101/724427
Submission date Jun 15, 2018
Last update date Mar 25, 2020
Contact name Andreas Kloetgen
Organization name Helmholtz Centre for Infection Research
Department Department for Computational Biology of Infection Research
Street address Inhoffenstr 7
City Braunschweig
State/province NI
ZIP/Postal code 38124
Country Germany
 
Platforms (4)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (59)
GSM3967075 T cell CTCF rep1 (ChIP-seq)
GSM3967076 T cell CTCF rep2 (ChIP-seq)
GSM3967077 T cell input (ChIP-seq)
This SuperSeries is composed of the following SubSeries:
GSE115893 Dynamic 3D chromosomal landscapes in acute leukemia [ChIP-Seq]
GSE115894 Dynamic gene expression in T-ALL following treatment and release of gamma-secretase inhibition [GRO-Seq]
GSE115895 Dynamic 3D chromosomal landscapes in acute leukemia [RNA-Seq]
Relations
BioProject PRJNA476370

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE115896_RAW.tar 760.0 Kb (http)(custom) TAR (of BED, TSV)
SRA Run SelectorHelp

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