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Series GSE116719 Query DataSets for GSE116719
Status Public on Sep 17, 2020
Title Comparison of epithelial cells from various epithelia and hair follicle stem cells [microarray]
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary The potency of an adult stem cell is restricted to certain lineages during embryonic life, in response to a specific microenvironment (the niche) and it is maintained for life. Lineage restriction is considered immutable. We have investigated if adult stem cells isolated from different epithelia could change fate by exposing them to a hairy skin niche. We have demonstrated that clonogenic stem cells restricted to a single epithelial lineage and cultured from various Tp63-expressing tissues e.g, the bladder the oral mucous, the oesophagus or the thymus can acquire new functionality. When exposed to a hair skin microenvironment, these stem cells acquire the capacity to generate hair follicles and sebaceous glands, thus behaving like bona fide hairy skin multipotent stem cells. Genome wide-screen analysis has demonstrated that the stem cells express transcription factors typical of hair follicle differentiation, even though they continue to express some of the genes linked to their origin. This increase in potency demonstrates that lineage restriction is not immutable.
 
Overall design Expression profile difference between hair follicle and cells from various epithelia before and after transplantation into skin
 
Contributor(s) Claudinot S, Oshima H, Gonneau C, Bonfanti P, Martens G, Littman D, Nicolas M, Rochat A, Barrandon Y, Pradervand S, Hagenbüchle O
Citation(s) 33159086
Submission date Jul 06, 2018
Last update date Nov 16, 2020
Contact name Sandra Calderon
Organization name University of Lausanne
Department Center for Integrative Genomics
Lab Lausanne Genomics Technologies Facility
Street address Génopode Building
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platforms (1)
GPL6247 [RaGene-1_0-st] Affymetrix Rat Gene 1.0 ST Array [transcript (gene) version]
Samples (20)
GSM3259315 SR1BC_V_rep1
GSM3259316 SR1BC_V_rep2
GSM3259317 SR1Va_IV_rep1
Relations
BioProject PRJNA479981

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Supplementary file Size Download File type/resource
GSE116719_RAW.tar 78.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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