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| Status |
Public on Oct 23, 2018 |
| Title |
RNA-seq transcriptome analyses in T47D cells treated with ActA and Palbociclib. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We performed SMAD2 ChIP-seq analysis in T47D cells with/without Palbociclib treatment. To validate whether the changes in SMAD2 binding to the genome indeed resulted in changes in target gene expression, we performed RNA-seq transcriptome analyses in T47D with/without ActA stimulation and Palbo treatment.
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| Overall design |
RNA-seq transcriptome analyses performed in estrogen receptor positive breast cancer T47D with/without ActA stimulation and Palbo treatment.
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| Contributor(s) |
Harada M, Morikawa M, Ozawa T, Tamura Y, Miyazono K, Koinuma D |
| Citation(s) |
30343527 |
| Submission date |
Jul 23, 2018 |
| Last update date |
Mar 01, 2019 |
| Contact name |
Daizo Koinuma |
| E-mail(s) |
d-koinuma@umin.ac.jp
|
| Organization name |
University of Tokyo
|
| Department |
Pathology
|
| Street address |
Hongo 7-3-1, Bunkyo-ku
|
| City |
Tokyo |
| ZIP/Postal code |
113-0033 |
| Country |
Japan |
| |
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| Platforms (1) |
| GPL17303 |
Ion Torrent Proton (Homo sapiens) |
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| Samples (4)
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| This SubSeries is part of SuperSeries: |
| GSE117502 |
SMAD2 binding regions in breast cancer cell line and RNA-seq transcriptome analyses in T47D |
|
| Relations |
| BioProject |
PRJNA482345 |
| SRA |
SRP154856 |
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