NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE118148 Query DataSets for GSE118148
Status Public on Feb 21, 2019
Title RNA-seq analysis of AKTi MK2206 resistant BT474 and T47D cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary BRD4 assembles transcriptional machinery at gene super-enhancer regions and governs the expression of genes that are critical for cancer progression. However, it remains unclear whether BRD4-mediated gene transcription is required for tumor cells to develop drug resistance. Our data show that prolonged treatment of luminal breast cancer cells with AKT inhibitors induces FOXO3a de-phosphorylation, nuclear translocation, and disrupts its association with SIRT6, eventually leading to FOXO3a acetylation as well as BRD4 recognition. Acetylated FOXO3a recognizes the BD2 domain of BRD4, recruits the BRD4/RNAPII complex to the CDK6 gene promoter and induces its transcription. Pharmacological inhibition of either BRD4/FOXO3a association or CDK6 significantly overcomes the resistance of luminal breast cancer cells to AKT inhibitors in vitro and in vivo. Our study reports the involvement of BRD4/FOXO3a/CDK6 axis in AKTi resistance and provides potential therapeutic strategies for treating resistant breast cancer.
 
Overall design Total RNA was extracted from MK2206 resistant cells for RNA sequencing. Parental cells without MK2206 resistance were used as controls.
 
Contributor(s) Zhou BP, Shi J
Citation(s) 30518851
Submission date Aug 06, 2018
Last update date Mar 21, 2019
Contact name Binhua P Zhou
E-mail(s) peter.zhou@uky.edu
Phone 859-323-4474
Organization name University of Kentucky School of Medicine
Department Markey Cancer Center/Biochemistry
Lab Zhou's lab
Street address 789 South Limestone
City Lexington
State/province KY
ZIP/Postal code 40536
Country USA
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (4)
GSM3319531 BT474_Control
GSM3319532 BT474_MK2206_resistant
GSM3319533 T47D_Control
Relations
BioProject PRJNA484709
SRA SRP156436

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118148_BT474_and_T47D_MK2206_resistant_fpkm.txt.gz 2.4 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap