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Series GSE118842 Query DataSets for GSE118842
Status Public on Sep 23, 2020
Title Description of transcriptome in non-small cell lung cancer cell lines without KEAP1/NRF2 mutations in response to an electrophilic reagent dimethylmaleate (DEM)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We report DEM-induced changes in the transcriptome of ABC1 and HCC4006 cell lines.
 
Overall design RNA-seq analysis in 2 cell types (ABC1 and HCC4006) after treatment with DEM or vehicle (DMSO).
 
Contributor(s) Okazaki K, Anzawa H, Katsuoka F, Sekine H, Motoike I, Tadaka S, Kinoshita K, Motohashi H
Citation(s) 33219226
Submission date Aug 21, 2018
Last update date Jul 29, 2022
Contact name Hozumi Motohashi
E-mail(s) hozumi.motohashi.a7@tohoku.ac.jp
Phone 81-22-717-8089
Organization name Tohoku University
Department Medical Biochemistry
Street address 2-1 Seiryo-machi, Aoba-ku
City Sendai
ZIP/Postal code 980-8575
Country Japan
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (8)
GSM3349055 ABC1-vehicle_0
GSM3349056 ABC1-DEM_0
GSM3349057 ABC1-vehicle_1
This SubSeries is part of SuperSeries:
GSE118844 NRF2-dependent transcriptome and H3K27ac distribution in non-small cell lung cancer
Relations
BioProject PRJNA486962
SRA SRP158497

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118842_ABC1-deseq.res.tab.gz 1.2 Mb (ftp)(http) TAB
GSE118842_HCC4006-deseq.res.tab.gz 1.2 Mb (ftp)(http) TAB
GSE118842_RAW.tar 2.4 Mb (http)(custom) TAR (of TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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