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Series GSE119547 Query DataSets for GSE119547
Status Public on Sep 06, 2018
Title RNA expression of stretched versus unstretched primary murine sinusoidal endothelial cells.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Primary murine sinusoidal endothelial cells were subjected to cyclic stretch and their gene expression profiles assessed by RNA-sequencing.
Overall design Primary sinusoidal endothelial cells were isolated from mouse liver and then plated on Flexcell plates coated in collagen IV. The cells were serum starved and then subjected to cyclic stretch. RNA was isolated and RNA-sequencing was done to compare changes in gene expression which occur secondary to cyclic stretch.
Contributor(s) Hilscher M
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Submission date Sep 05, 2018
Last update date Feb 11, 2019
Contact name Aditya Bhagwate
Organization name Mayo Clinic
Street address 200 1st Street SW
City Rochester
State/province MN
ZIP/Postal code 55905
Country USA
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (6)
GSM3377384 67_mEC_Control_2
GSM3377385 68_mEC_Control_3
GSM3377386 69_mEC_Control_4
BioProject PRJNA489495
SRA SRP159687

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE119547_mEC_Control_vs_mEC_Stretch.diffexp.rpkm.tsv.gz 2.2 Mb (ftp)(http) TSV
GSE119547_mEC_Control_vs_mEC_Stretch_raw.tsv.gz 617.9 Kb (ftp)(http) TSV
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Raw data are available in SRA
Processed data are available on Series record

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