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Series GSE121308 Query DataSets for GSE121308
Status Public on Jul 26, 2019
Title Neonatal mice adopt to pressure overload by inducing cardiomyocyte proliferation and angiogenesis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Backgound: Cardiac pressure overload, for example in patients with aortic stenosis, induces irreversible damage in the myocardium leading to cardiac dysfunction, cardiomyocyte hypertrophy and interstitial fibrosis. We therefore hypothesized that insufficient cardiac regeneration might contribute to the progression of pressure overload dependent disease. Here, we aimed to elucidate whether pressure overload in the regenerative stage shortly after birth could lead to a more adaptive cardiac response than in the non-regenerative stage in mice.nTAC in the non-regenerative stage induced cardiac dysfunction, myocardial fibrosis and cardiomyocyte hypertrophy. In contrast, during induction of nTAC in the regenerative stage, cardiac function remained intact and this was associated with enhanced myocardial angiogenesis and innervation as well as increased cardiomyocyte proliferation, but neither hypertrophy nor fibrosis. Mechanistically, inhibition of cardiomyocyte proliferation and angiogenesis in nTAC in the regenerative phase by rapamycin triggered mortality and myocardial fibrosis, which both also similarly occurred upon inhibition of angiogenesis by PTK787, suggesting that both processes are essential for the adaptive cardiac response to nTAC. A comparative genome-wide transcriptomic analysis between hearts after nTAC in the regenerative versus the non-regenerative stage defined differentially expressed functional gene classes, and a related bioinformatics analysis suggested the transcription factor GATA4 as master regulator of the regenerative gene-program. Indeed, cardiomyocyte specific deletion of GATA4 converted the regenerative nTAC into a non-regenerative, maladaptive response.tablished a new model of neonatal pressure-overload in mice, which when applied in the regenerative postnatal stage, triggers a purely adaptive myocardial response. Employing this model to identify new regulators might lead to novel therapeutic strategies to combat pressure overload induced myocardial disease.
 
Overall design We established a transverse aortic constriction protocol in neonatal mice (nTAC) that could be induced either in the regenerative (at postnatal day P1) or in the non-regenerative stage (at P7) after birth. Echocardiography was used to assess cardiac dimensions and function in neonatal mice. Myocardial histological examinations were conducted to assess interstitial fibrosis, angiogenesis, innervation and cardiomyocyte proliferation. RNA deep sequencing was employed to compare the cardiac gene-expression pattern between nTAC in the regenerative versus the non-regenerative stage.
 
Contributor(s) Heineke J, Mohammadi MM, Cordero J
Citation(s) 31335322
Submission date Oct 16, 2018
Last update date Jul 26, 2019
Contact name Joerg Heineke
E-mail(s) Joerg.Heineke@medma.uni-heidelberg.de
Organization name Medizinische Fakultät Mannheim
Department – Department of Cardiovascular Research (HKF)
Street address Ludolf-Krehl-Str. 7-11
City Mannheim
State/province Baden Wuttemberg
ZIP/Postal code 68167
Country Germany
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (9)
GSM3431154 ctr_neonatal_sham_rep1
GSM3431155 ctr_neonatal_sham_rep2
GSM3431156 ctr_neonatal_sham_rep3
Relations
BioProject PRJNA497045
SRA SRP165855

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121308_RAW.tar 382.5 Mb (http)(custom) TAR (of BW)
GSE121308_count_transcripts_TMM_edgeR.txt.gz 720.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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