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Series GSE121675 Query DataSets for GSE121675
Status Public on May 15, 2019
Title Alterations in Gene Expression in Nicotiana tabacum Expressing ISPS
Organism Nicotiana tabacum
Experiment type Expression profiling by high throughput sequencing
Summary Genetically engineering Nicotiana tabacum to express Isoprene Synthase (ISPS) leads to changes in expression of genes assoiated with many growth regulator signaling pathways and signaling networks involved in abiotic and biotic stress responses.
 
Overall design Nicotiana tabacum transformed with a Populus alba ISPS (line NE) and the corresponding non-emitting azygous control (NE), grown under unstressed growth conditions were subjected to RNA-Seq
 
Contributor(s) Sharkey TD
Citation(s) 30760638
Submission date Oct 23, 2018
Last update date May 15, 2019
Contact name Thomas Sharkey
E-mail(s) tsharkey@msu.edu
Phone (517) 353-3257
Organization name Michigan State University
Department Biochemistry and Molecular Biology
Lab MSU-DOE Plant Research Laboratory
Street address 612 Wilson Rd, Rm 210 Plant Biology Building
City East Lansing
State/province MI
ZIP/Postal code 48824
Country USA
 
Platforms (1)
GPL22345 Illumina HiSeq 2500 (Nicotiana tabacum)
Samples (6)
GSM3443237 IE Rep 2
GSM3443238 IE Rep 3
GSM3443239 IE Rep 4
This SubSeries is part of SuperSeries:
GSE121676 Alterations in Gene Expression in Arabidopsis thaliana and Nicotiana tabacum Expressing ISPS
Relations
BioProject PRJNA498075
SRA SRP166520

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121675_Alterations_in_Gene_Expression_in_Nicotiana_tabacum_Expressing_ISPS.csv.gz 2.0 Mb (ftp)(http) CSV
GSE121675_Ntab-TN90_AYMY-SS_NGS_rnaseq.gff3.gz 13.0 Mb (ftp)(http) GFF3
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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