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Series GSE121783 Query DataSets for GSE121783
Status Public on Oct 26, 2018
Title The effects of basal LH inhibition with Cetrorelix on cumulus cell gene expression during the luteal phase under ovarian coasting stimulation in cattle.
Organism Bos taurus
Experiment type Expression profiling by array
Summary impact of suppressing LH using the GnRH antagonist Cetrorelix during an ovarian coasting stimulation protocol on the transcriptome of bovine cumulus cells (CC). Oocytes were collected twice from six dairy cows. For the first collection, the cows received FSH twice daily for three days, followed by FSH withdrawal for 68 hours as control protocol. For the second collection, the same stimulation protocol was used, but the cows also received, starting on day 2 of FSH stimulation, a GnRH antagonist once a day until recovery of the cumulus-oocyte complexes (COC). Half of the COC were subjected to in vitro maturation, fertilization and culture to assess blastocyst rates. The other half of the CC underwent microarray analysis (n=3 cows, 2 treatments, 6 oocyte collections) and qRT-PCR (n=6 cows: 3 microarray cows + 3 other cows, 2 treatments, 12 oocyte collections). The differential expression of specific genes was confirmed by RT-qPCR: ATP6AP2, SC4MOL, OSTC and PTGDS. The global transcriptomic analysis of cumulus cells demonstrated that the inhibition of LH secretion may decrease survival, and growth of the follicle. Moreover, the results suggested that LH may be important to cumulus for the maintenance of cellular mechanisms such as global RNA expression, protein and nucleic acid metabolism and energy production. These results support the hypothesis that LH support is important during the final part of follicle maturation through its influence on the cumulus cells.
 
Overall design This is a 2 conditions experiment with cumulus cells collected after FSH withdrawal for 68 hours. Three biological replicates for each treatment and each were hybridized on a dye swap design.
 
Contributor(s) Bunel A, Nivet A, Blondin P, Vigneault C, Richard FJ, Sirard M
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Submission date Oct 25, 2018
Last update date Oct 27, 2018
Contact name Marc-André Sirard
E-mail(s) Marc-Andre.Sirard@fsaa.ulaval.ca
Organization name Université Laval
Department Sciences Animales
Street address Offfice 2732, 2440 Hochelaga Blvd.
City Québec City
State/province Quebec
ZIP/Postal code G1V 0A6
Country Canada
 
Platforms (1)
GPL13226 Agilent-028298 Embryogene Bovine 45K microarray
Samples (6)
GSM3446033 Array 1_Cum_68h-Cetro
GSM3446034 Array 2_Cum_68h-Cetro
GSM3446035 Array 3_Cum_68h-Cetro
Relations
BioProject PRJNA498422

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121783_RAW.tar 11.4 Mb (http)(custom) TAR (of TXT)
GSE121783_normalized_data_with_all_controls.txt.gz 2.6 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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