NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE121967 Query DataSets for GSE121967
Status Public on Jan 01, 2021
Title Transcriptome changes in pea leaves with sulfur deficency/sufficiency during reproductive phase
Organism Pisum sativum
Experiment type Expression profiling by array
Summary transcriptome changes in pea leaves with sulfur deficency/sufficiency during reproductive phase.-Characterization of transcriptome changes in leaves of wild-type and PsSultr4 mutant lines (for a sulfur transporter) subjected or not to sulfur deficiency during the reproductive phase

4plex_pea_2014_01 - transcriptome changes in pea leaves with sulfur deficency/sufficiency during reproductive phase. - Role of sulfur and of the sulfate store in leaf metabolism. - Comparison of: 1- The leaf transcriptome of pea subjected or not to sulfur deficiency during the reproductive phase (S+ versus S –) 2- The leaf transcriptome of wild-type and mutant lines for a sulfur transporter (two TILLING alleles) grown under sulfur sufficient conditions : WT1/Mut1 S+ et WT2/Mut2 S+ 3- The leaf transcriptome of wild-type and mutant lines for a sulfur transporter (two TILLING alleles) grown under sulfur deficient conditions : WT1/Mut1 S+ et WT2/Mut2 S+
 
Overall design 20 dye-swap - gene knock out,genotype comparaison,treated vs untreated comparison

WT alleles: 4693 and 2684. Allele ID is included in sample title and source name.
Mutant alleles are also named 4693 and 2684. Allele ID is included in sample title and source name.
A supplementary file is included below with sample and corresponding allele numbers.
Web link http://urgv.evry.inra.fr/cgi-bin/projects/CATdb/consult_expce.pl?experiment_id=627
 
Contributor(s) Pateyron S, Gallardo K, Balzergue S, Martin-Magniette M
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 30, 2018
Last update date Jan 02, 2021
Contact name Stéphanie Pateyron
E-mail(s) pateyron@evry.inra.fr
Organization name IPS2_Institute of Plant Sciences Paris-Saclay
Lab Transcriptomic Plateforme POPS
Street address Rue de Noetzlin _ Batiment 630
City Orsay
ZIP/Postal code 91405
Country France
 
Platforms (1)
GPL25688 4PLEX_PEA
Samples (40)
GSM3451719 256402110001_b1 - 1_1WT(4693)_S-_rep1 vs 5_1Mut(4693)_S-_rep1
GSM3451720 256402110001_b2 - 5_1Mut(4693)_S-_rep1 vs 1_1WT(4693)_S-_rep1
GSM3451721 256402110001_b3 - 2_2WT(4693)_S-_rep2 vs 6_2Mut(4693)_S-_rep2
Relations
BioProject PRJNA501874

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121967_4plex_pea_2014_01_samples_identification_GEO.xlsx 14.3 Kb (ftp)(http) XLSX
GSE121967_RAW.tar 836.8 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap