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Series GSE122125 Query DataSets for GSE122125
Status Public on Jan 25, 2023
Title Comparative Transcriptomic Signature of the Simulated Microgravity Response in C. elegans
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Summary N2 worms were cultured in ground control conditions for three weeks, exposed to simulated microgravity for four days. Next, the maintained impact in the gene expression after the exposure was investigated after return to ground condition on days four, eight, and twelve.
 
Overall design The animals were cultured in CeHR medium for three weeks after synchronization for allowing acclimatization to liquid conditions and reducing the effects of liquid cultivation on gene expression profiles. The ground control animals were maintained in CeHR medium in 20 mL scintillation. Then, the worms were exposed to clinostat-simulated microgravity for four days and the maintained impacts were observed at four, eight, and twelve days after placing the worms back to ground control conditions
 
Contributor(s) Celen I, Doh JH, Sabanayagam CR
Citation(s) 36672205
Submission date Nov 04, 2018
Last update date Jan 25, 2023
Contact name Irem Celen
E-mail(s) irem@udel.edu
Organization name University of Delaware
Street address 15 Innovation Way
City Newark
State/province DE
ZIP/Postal code 19711
Country USA
 
Platforms (1)
GPL18245 Illumina HiSeq 2500 (Caenorhabditis elegans)
Samples (15)
GSM3455750 N2 Ground Control Rep 1
GSM3455751 N2 Ground Control Rep 2
GSM3455752 N2 Ground Control Rep 3
Relations
BioProject PRJNA503714
SRA SRP167787

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE122125_gene_exp.diff.gz 12.2 Mb (ftp)(http) DIFF
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Raw data are available in SRA
Processed data are available on Series record

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