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Series GSE122160 Query DataSets for GSE122160
Status Public on Nov 05, 2023
Title Expression data from monocyte-derived macrophages co-cultured in the presence of multiple myeloma (MM) cell line and/or MM-bone marrow stromal cell (BMSC)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Bone marrow (BM) microenvironment of multiple myeloma (MM) is populated by tumor associated monocytes and macrophages (TAMs), where they protect clonal plasma cells (PC). It is well known that MM cells can modulate the transcriptome of macrophages, thus, we sought to investigate if a key component of the tumor microenvironment such as MM-BMSCs have the potential to modulate the transcriptome of macrophages as MM cells do.
We used microarrays to analyze the potential of MM-BMSC to polarize the transcriptome of TAMs in the presence and absence of MM cells
 
Overall design MACS sorted CD14+ monocytes from healthy donors were cultured in 12 well plates in the presence of 10 ng/ml of M-CSF for 7 days to differentiate into macrophages (MDM). On the seventh day cells were harvested and co-cultured in the presence of MM cells, MM-BMSC or both for 24 hrs. Afterwards macrophages were FACSsorted and stored in RLT Plus buffer till RNA extraction.
 
Contributor(s) Zabaleta A, Paiva B
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Submission date Nov 05, 2018
Last update date Nov 05, 2023
Contact name Aintzane Zabaleta
E-mail(s) azabaletaa@unav.es
Organization name FOUNDATION FOR APPLIED MEDICAL RESEARCH
Street address Avda. Pío XII 55
City Pamplona
State/province Navarra
ZIP/Postal code 31008
Country Spain
 
Platforms (1)
GPL16686 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [transcript (gene) version]
Samples (10)
GSM3457060 MDM_1
GSM3457061 MDM_2
GSM3457062 MDMpMM1S_1
Relations
BioProject PRJNA503854

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Supplementary file Size Download File type/resource
GSE122160_RAW.tar 79.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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