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Series GSE123295 Query DataSets for GSE123295
Status Public on Dec 04, 2018
Title Characterization of Wnt-Tcf functions during Ciona heart development
Organism Ciona robusta
Experiment type Expression profiling by high throughput sequencing
Summary To assay Tcf functions during early cardiopharyngeal specification, bulk RNAseq were performed to profile the FACS-purified cardiopharyngeal lineage cells isolated from 15 and 18hpf Ciona larvae with CRISPR/Cas9-mediated Tcf mutagenesis.
 
Overall design Examination of CRISPR/Cas9-mediated Tcf mutagenesis in TVCs from two (15&18hpf) time points.
 
Contributor(s) Kaplan N, Wang W, Christiaen L
Citation(s) 30635127
Submission date Dec 03, 2018
Last update date Mar 05, 2019
Contact name wei wang
E-mail(s) ww39@nyu.edu
Phone +1 2129988381
Organization name New York University
Department Biology
Street address 100 washington square east
City New York
State/province NY
ZIP/Postal code 10003
Country USA
 
Platforms (1)
GPL23563 Illumina HiSeq 2500 (Ciona robusta)
Samples (8)
GSM3499452 controlgrna15hpf1
GSM3499453 controlgrna15hpf2
GSM3499454 controlgrna18hpf1
Relations
BioProject PRJNA508201
SRA SRP172121

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE123295_RAW.tar 510.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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