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Series GSE123393 Query DataSets for GSE123393
Status Public on Jun 07, 2024
Title Genome-wide chromatin localization profiling of transcription factor MML-1
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary MML-1 (Myc and Mondo-Like) encodes a Myc superfamily protein which, together with its partner MXL-2 (Max-like), regulates lifespan via distinct gene sets important for longevity. It is also required for normal migration of ray precursor cells in the male tail and for proper epidermal expression of extracellular matrix component genes. MML-1 binds to MXL-2, required for its protein stability. The MML-1/MXL-2 complex activate transcription mostly via E-box elements.
 
Overall design Profiling of MML-1 chromatin localization in wild-type third larval (L3) stage Caenorhabditis elegans
 
Contributor(s) Esse R, Grishok A
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Submission date Dec 06, 2018
Last update date Jun 07, 2024
Contact name Ruben Esse
E-mail(s) ruben.esse@kcl.ac.uk
Organization name King’s College London
Department Department of Medical and Molecular Genetics
Street address Guy's Hospital, Great Maze Pond
City London
ZIP/Postal code SE1 9RT
Country United Kingdom
 
Platforms (1)
GPL19757 Illumina NextSeq 500 (Caenorhabditis elegans)
Samples (4)
GSM3502601 Input DNA replicate A
GSM3502602 Input DNA replicate B
GSM3502603 MML-1 ChIP DNA replicate A
Relations
BioProject PRJNA508616
SRA SRP172685

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE123393_RAW.tar 352.6 Mb (http)(custom) TAR (of BED, BEDGRAPH, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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