|
| Status |
Public on Feb 11, 2019 |
| Title |
RNA-seq analysis of alleles of the atrR transcription factor-encoding gene in Aspergillus fumigatus |
| Organism |
Aspergillus fumigatus Af293 |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Determine the transcriptomic response of Aspergillus fumigatus strains to different alleles of atrR
|
| |
|
| Overall design |
RNA-seq in strains containing a wild-type version of atrR, a null allele or two different hyperactive mutants (atrR-3X HA or hspA-atrR)
|
| |
|
| Contributor(s) |
Paul S, Stamnes M, Moye-Rowley S |
| Citation(s) |
30862750 |
| |
| Submission date |
Dec 06, 2018 |
| Last update date |
Apr 02, 2019 |
| Contact name |
Scott Moye-Rowley |
| E-mail(s) |
scott-moye-rowley@uiowa.edu
|
| Phone |
3193357874
|
| Organization name |
University of Iowa
|
| Department |
Molecular Physiology & Biophysics
|
| Street address |
6-530 Bowen Science Bldg./Dept. of Mol Physio
|
| City |
Iowa City |
| State/province |
Iowa |
| ZIP/Postal code |
52242 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL25907 |
Illumina HiSeq 4000 (Aspergillus fumigatus Af293) |
|
| Samples (8)
|
|
| This SubSeries is part of SuperSeries: |
| GSE123446 |
AtrR is an essential determinant of azole resistance in Aspergillus fumigatus |
|
| Relations |
| BioProject |
PRJNA508764 |
| SRA |
SRP172756 |
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