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Series GSE124763 Query DataSets for GSE124763
Status Public on Feb 24, 2020
Title Myopalladin promotes muscle growth through modulation of the serum response factor pathway
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Myopalladin (MYPN) is a striated muscle-specific protein located in the Z-line and I-band of the sarcomere as well as the nucleus. Analysis of MYPN knockout (MKO) mice showed a 48% reduction in myofiber cross-sectional area in MKO mice and a consequent reduction in isometric force generation and power output. Similarly, reduced myotube width was observed in MKO primary myoblast cultures. RNA-Seq studies revealed downregulation of serum response factor (SRF)-target genes in MKO mice, important for muscle growth and differentiation, and further studies revealed that MYPN, like its homologue PALLD, can bind and bundle filamentous actin as well as interact with MRTF-A, both major players in the regulation of the SRF pathway. Consistently, MYPN increased MRTF-A-mediated activation of SRF signaling in myogenic cells, and transduction of MKO myoblasts with constitutive active SRF rescued the reduced myotube width, demonstrating that MYPN promotes skeletal muscle growth through activation of the SRF pathway.
 
Overall design Profiling of the transcriptome of tibialis anterior muscle from 2- and 4-week-old MYPN knockout and control mice. Two biological replicates were profiled for each condition and time point.
 
Contributor(s) Serio S, Filomena MC, Bang M
Citation(s) 31647200
Submission date Jan 07, 2019
Last update date Feb 24, 2020
Contact name Simone Serio
E-mail(s) simone.serio@humanitasresearch.it
Organization name Humanitas Research Hospital
Department Cardiovascular Medicine
Street address Via Alessandro Manzoni, 56
City Rozzano
State/province Milano
ZIP/Postal code 20089
Country Italy
 
Platforms (1)
GPL15103 Illumina HiSeq 1000 (Mus musculus)
Samples (8)
GSM3553504 WT_2wk_repA
GSM3553505 WT_2wk_repB
GSM3553506 MKO_2wk_repA
Relations
BioProject PRJNA513343
SRA SRP176463

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124763_RAW.tar 9.0 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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