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Series GSE125015 Query DataSets for GSE125015
Status Public on Sep 21, 2019
Title Translational profiling of proximal tubule in fibrotic kidney
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Injury to the proximal tubule plays a central role in the initiation and progression of kidney fibrosis, and rates of chronic kidney disease progresses approximately 50% faster in males compared to females. We applied Translating Ribosome Affinity Purification (TRAP) followed by RNA-sequencing to characterize the cell-specific proximal tubule transcriptional landscape during fibrosis in male vs. female mice.
Overall design Promixal tubule was profiled by Translating Ribosome Affinity Purification (TRAP)
Contributor(s) Humphreys BD
Citation(s) 31537650
Submission date Jan 13, 2019
Last update date Dec 21, 2019
Contact name Haojia Wu
Organization name Washington University in St. Louis
Department Renal Division/Internal Medicine
Lab Humphreys Lab
Street address 600 S Euclid Ave
City St. Louis
State/province Missouri
ZIP/Postal code MO 63110
Country USA
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (42)
GSM3561139 Male.CLK.Total.1
GSM3561140 Male.CLK.Total.2
GSM3561141 Male.CLK.Total.3
BioProject PRJNA514912
SRA SRP178890

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125015_TRAP.UUO.RPKM.txt.gz 6.8 Mb (ftp)(http) TXT
GSE125015_TRAP.UUO.Raw.txt.gz 1.4 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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