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Status |
Public on Dec 10, 2022 |
Title |
ATAC-seq of purified immune cell populations |
Organism |
Homo sapiens |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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Summary |
ATAC-seq was carried out to identify regions of nucleosome depletion – marking sites of enhancers and promoters – in the MACS populations of CD4, CD8, CD14, CD19 and Natural Killer (NK) immune cells
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Overall design |
Three donors (two male, one female) provided peripheral blood for the isolation by magnetic activated cell sorting (MACS) of immune cells. A total of 5 populations of cells were isolated per donor and two technical replicates were performed.
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Contributor(s) |
Downes DJ, Gosden M, Davies J, Dendrou C, Hughes JR |
Citation missing |
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Submission date |
Jan 16, 2019 |
Last update date |
Dec 12, 2022 |
Contact name |
Damien Downes |
E-mail(s) |
damien.downes@ndcls.ox.ac.uk
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Phone |
01865222374
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Organization name |
The University of Oxford
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Department |
MRC Weatherall Institute of Medicine
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Street address |
John Radcliffe Hospital
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City |
Headington |
State/province |
Oxfordshire |
ZIP/Postal code |
OX3 9DU |
Country |
United Kingdom |
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Platforms (1) |
GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
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Samples (29)
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Relations |
BioProject |
PRJNA515467 |
SRA |
SRP179744 |