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Series GSE12527 Query DataSets for GSE12527
Status Public on Oct 16, 2008
Title Small RNA from S2 cell infected with FHV deltaB2 particle
Organism Drosophila melanogaster
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary S2 cells were infected with FHV deltaB2 particle and the S2 cells were harvested to isolate total RNA at 96 hpi. Small RNAs were separated on a denaturing 15% polyacrylamide gel. Ligation to adapters requires 5' monophosphate and 3' OH.

Note: The base quality (.qual) file corresponding to the fasta format (.fna) file linked to Sample GSM306489 is unavailable.
 
Overall design Small RNAs were sequenced from S2 cell after virus infection.
 
Citation(s) 18854242
Submission date Aug 22, 2008
Last update date Mar 20, 2012
Contact name Qingfa Wu
E-mail(s) qingfawu@ucr.edu
Phone 1-951-827-2340
Organization name UC Riverside
Lab Shou-Wei Ding
Street address 900 University Ave
City Riverside
State/province CA
ZIP/Postal code 92507
Country USA
 
Platforms (1)
GPL7074 Ding Lab fruit fly S2 cell small RNAs (454 sequencing)
Samples (1)
GSM306489 S2 cell infected with FHV deltaB2 particle
Relations
BioProject PRJNA112933

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE12527_RAW.tar 190.0 Kb (http)(custom) TAR (of FNA)
Processed data included within Sample table

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