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| Status |
Public on Jan 19, 2019 |
| Title |
Genome-wide maps of chromatin remodeler binding in acute myeloid leukemia cell line. |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We have used chromatin immunoprecipitation followed by high throughput sequencing to map regions of chromatin remodeler binding in Control and KDM6A knock down AML cells. We have used this data to determine KDM6A contribution to chromatin remodeler binding and thus understand its role in leukemogenesis.
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| |
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| Overall design |
Binding profile of the core ATP-ase subunit of the NuRD chromatin remodeler in Control and KDM6A knock down AML cell line.
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| |
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| Contributor(s) |
Sengupta A |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jan 18, 2019 |
| Last update date |
Mar 27, 2019 |
| Contact name |
Amitava Sengupta |
| E-mail(s) |
sayantani0904@gmail.com
|
| Phone |
+91 9681155400
|
| Organization name |
CSIR - Indian Institute of Chemical Biology (Translational Research Unit of Excellence)
|
| Department |
Cancer Biology & Inflammatory Disorder Division
|
| Lab |
Stem Cell & Leukemia Lab
|
| Street address |
CN 6, Sector V, Salt Lake
|
| City |
Kolkata |
| State/province |
West Bengal |
| ZIP/Postal code |
700091 |
| Country |
India |
| |
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| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (4)
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| Relations |
| BioProject |
PRJNA515835 |
| SRA |
SRP180171 |
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