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Series GSE125754 Query DataSets for GSE125754
Status Public on Jan 29, 2019
Title RNASeq of trigeminal ganglia of chicken and wild duck species
Organisms Aix sponsa; Anas platyrhynchos; Oxyura jamaicensis; Gallus gallus; Histrionicus histrionicus; Anas rubripes; Aythya affinis
Experiment type Expression profiling by high throughput sequencing
Summary A major challenge in biology is to link cellular and molecular variations with behavioral phenotypes. Here, we approached this by studying somatosensory neurons from a panel of bird species from the family Anatidae, known for their tactile-based foraging behavior. We found that tactile specialists exhibit a proportional expansion of neuronal mechanoreceptors in trigeminal ganglia. The expansion of mechanoreceptors occurs via neurons with intermediately and slowly inactivating mechano-current. Such neurons contain the Piezo2 ion channel, whose expression positively correlates with the expression of factors responsible for the development and function of touch receptors. Conversely, Piezo2 expression negatively correlates with expression of molecules mediating the detection of temperature and pain, suggesting that the expansion of Piezo2-containing mechanoreceptors with prolonged mechano-current occurs at the expense of other types of sensory neurons. Our study reveals a general mechanism of tactile specialization in vertebrates at the level of somatosensory system.
 
Overall design High-throughput deep sequencing of the mRNA isolated from trigeminal ganglia of 7 bird species; 3 biological replicates per species; Total of 21 samples.
 
Contributor(s) Schneider ER, Anderson EO, Feketa VV, Mastrotto M, Nikolaev YA, Gracheva EO, Bagriantsev SN
Citation(s) 30784581
Submission date Jan 28, 2019
Last update date Apr 30, 2019
Contact name Viktor Feketa
E-mail(s) viktor.feketa@yale.edu
Organization name Yale University
Department Cellular & Molecular Physiology
Lab Sensory Physiology lab
Street address 333 Cedar St SHM BE58
City New Haven
State/province CT
ZIP/Postal code 06510
Country USA
 
Platforms (7)
GPL19005 Illumina HiSeq 2500 (Gallus gallus)
GPL22591 Illumina HiSeq 2500 (Anas platyrhynchos)
GPL26107 Illumina HiSeq 2500 (Anas rubripes)
Samples (21)
GSM3581479 Pekin duck Replicate 1
GSM3581480 Pekin duck Replicate 2
GSM3581481 Pekin duck Replicate 3
Relations
BioProject PRJNA517454
SRA SRP182673

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125754_DuckRNASeq_RPKMs_IDs_crossmatched_geosubmission.xlsx 2.7 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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