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Series GSE125850 Query DataSets for GSE125850
Status Public on Jan 30, 2019
Title Inhibition of EHMT1/2 rescues synaptic and cognitive functions for Alzheimer's disease
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Epigenetic dysregulation, which leads to the alteration of gene expression in the brain, is suggested as one of the key pathophysiological bases of aging and neurodegeneration. Here we found that, in the late-stage familial Alzheimer’s disease (FAD) mouse model, repressive histone H3 dimethylation at lysine 9 (H3K9Me2) and euchromatic histone methyltransferases, EHMT1 and EHMT2 (H3K9Me2 catalyzer), were significantly elevated in the prefrontal cortex (PFC) region of post-mortem tissues from human patients with Alzheimer's disease. Concomitantly, H3K9Me2 at the promoter region of glutamate receptors was increased in PFC of aged FAD mice, which was linked to the diminished transcription, expression and function of AMPA and NMDA receptors. Treatment of FAD mice with specific EHMT1/2 inhibitors reversed histone hyper-methylation and led to the recovery of glutamate receptor expression and excitatory synaptic function in PFC and hippocampus. Chromatin immunoprecipitation-sequencing (ChIP-seq) data indicated that FAD mice exhibited genome-wide increase of H3K9Me2 enrichment at genes involved in neuronal signaling (including glutamate receptors), which was reversed by EHMT1/2 inhibition. Moreover, the impaired recognition memory, working memory, and spatial memory in aged FAD mice were rescued by the treatment with EHMT1/2 inhibitors. These results suggest that disrupted epigenetic regulation of glutamate receptor transcription underlies the synaptic and cognitive deficits in Alzheimer's disease, and targeting histone methylation enzymes may represent a novel therapeutic strategy for this prevalent neurodegenerative disorder.
 
Overall design Examination of histone H3 dimethylation at lysine 9 in wild type mice, familial AD mice and familial AD mice treated with EHMT1/2 inhibitor
 
Contributor(s) Zheng Y, Liu A, Wang Z, Cao Q, Wang W, Lin L, Ma K, Zhang F, Wei J, Matas E, Cheng J, Chen G, Wang X, Yan Z
Citation(s) 30668640
Submission date Jan 29, 2019
Last update date Mar 21, 2019
Contact name Zhen Yan
E-mail(s) zhenyan@buffalo.edu
Phone (716) 829-3058
Organization name University at Buffalo
Department Physiology and Biophysics
Street address 124 Sherman Hall
City Buffalo
State/province NY
ZIP/Postal code 14214
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (12)
GSM3583145 WT_In_1: (WT1 input)
GSM3583146 WT_Ch_1: (WT1 ChIP)
GSM3583147 WT_In_2: (WT2 input)
Relations
BioProject PRJNA517703
SRA SRP182834

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125850_FAD_BIX_vs_FAD_peak_compare_table.tsv.gz 4.8 Mb (ftp)(http) TSV
GSE125850_FAD_vs_WT_peak_compare_table.tsv.gz 3.8 Mb (ftp)(http) TSV
GSE125850_README_Compare.txt 658 b (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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