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Series GSE126449 Query DataSets for GSE126449
Status Public on Feb 13, 2019
Title Host transcriptome sequencing of FACS-sorted human induced pluripotent stem cell-derived brain endothelial cells infected with Neisseria meningitidis
Organisms Homo sapiens; Neisseria meningitidis MC58
Experiment type Expression profiling by high throughput sequencing
Summary This study investigates host transcriptome changes of infected human iPS-derived brain endothelial cells in response to prolonged Nm infection (24h)
Overall design Infected cells were sorted and RNA was extracted. mRNA-Enriched Poly(A)-Tailed RNA was generated. Each cDNA library was then sequenced by Illumina to ~25-30 million reads.
Contributor(s) Gomes SM, Kim BJ, Menzel AA, Metzger M, Unkmeir AS, Förstner KU, Sauerwein TD, Westermann AJ
Citation(s) 31191497
Submission date Feb 12, 2019
Last update date Jun 24, 2019
Contact name Till David Sauerwein
Organization name ZB MED - Information Centre for Life Sciences
Department Data Science and Services
Street address Gleueler Str. 60
City Cologne
ZIP/Postal code 50931
Country Germany
Platforms (2)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL26178 Illumina NextSeq 500 (Homo sapiens; Neisseria meningitidis MC58)
Samples (2)
GSM3601990 24h Mock
GSM3601991 24h MC58 GFP +
BioProject PRJNA521959
SRA SRP185702

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126449_RAW.tar 941.3 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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