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Series GSE126664 Query DataSets for GSE126664
Status Public on Feb 17, 2019
Title Effect of prolonged exposure to normoxia on miRNA expression of primary mouse chondrocytes
Organism Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary miRNA profiles of primary mouse chondrocytes exposed to prolonged normoxia, which resulted in accumulation of oxidative stress. The sequencing data were generated by miRNA sequencing, in three biological replicates. This study provides insights into the role of chronic oxidative stress in chondrocytes and helps identification of miRNAs related to OA pathogenesis.
 
Overall design Total RNA was isolated from chondrocytes and subjected to small RNA-seq library preparation using the TruSeq kit (Illumina).
 
Contributor(s) Kim JH, Kang D
Citation(s) 30944169
Submission date Feb 16, 2019
Last update date May 31, 2019
Contact name Jin-Hong Kim
E-mail(s) snumrl301@gmail.com
Organization name Seoul National University
Street address 1 Gwanak-ro, Gwanak-gu
City Seoul
ZIP/Postal code 08826
Country South Korea
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM3610960 Control (passage 0), rep 1
GSM3610961 Control (passage 0), rep 2
GSM3610962 Control (passage 0), rep 3
Relations
BioProject PRJNA522876
SRA SRP186105

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126664_RAW.tar 40.0 Kb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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