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Series GSE126772 Query DataSets for GSE126772
Status Public on Dec 18, 2019
Title Macrophages directly contribute collagen to scar formation during zebrafish heart regeneration and mouse heart repair
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The adult mammalian heart heals after myocardial infarction (MI) by deposition of scar tissue, leading to downstream arrhythmia, remodelling and heart failure1. In contrast, adult zebrafish and neonatal mouse hearts are capable of regenerating after injury. Macrophages are key mediators of tissue repair and appear to be required for both regeneration and healing by scar formation, but the mechanisms underlying these distinct roles are poorly understood2-4. Here we investigated how macrophages differentially influence the mode of repair by determining their responses in scar-free versus scar-induced healing, comparing ventricular resection with cryo-injured adult zebrafish hearts and neonatal versus adult mouse hearts after MI. Unbiased transcriptomics revealed molecular programmes implicating macrophages in the initiation and resolution of inflammation to dictate the kinetics of scarring during zebrafish regeneration and the activation of direct and indirect pathways to drive fibrosis in the adult mouse heart. Most notably we observed up-regulation of collagen isoforms in both zebrafish and mouse macrophages following injury. Adoptive transfer of macrophages, from resected zebrafish hearts into cryo-injured hosts and splenic monocyte-derived macrophages from adult mouse donors into neonatal hearts, enhanced scar formation and induced fibrosis, respectively, via cell autonomous production of collagen. In zebrafish, macrophage-specific targeting of collagen 4a binding protein and cognate collagen 4a1 followed by transfer led to significantly reduced scarring in cryo-injured hosts, as further evidence of a direct macrophage contribution to collagen deposition and scar formation. These findings contrast with the current model of scarring, whereby collagen is laid down exclusively by myofibroblasts, and implicate macrophages as critical regulators of heart repair.
 
Overall design RNA sequencing of cardiac macrophages following myocardial infarction in the neonatal and adult mouse
 
Contributor(s) Cahill TJ, Simões FC, Kenyon A, Gavriouchkina D, Lemieux ME, Barnette DN, Rohling M, Weinberger M, Masmanian E, Williams R, Greaves DR, Choudhury RP, Sauka-Spengler T, Riley PR
Citation(s) 32001677
Submission date Feb 19, 2019
Last update date Feb 10, 2020
Contact name Thomas J Cahill
Organization name University of Oxford
Department Department of Physiology, Anatomy, & Genetics
Lab Riley
Street address Sherrington Building, Sherrington Rd
City Oxford
ZIP/Postal code OX1 3PT
Country United Kingdom
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (28)
GSM3612607 adult_pre_0
GSM3612608 adult_pre_1
GSM3612609 adult_pre_2
Relations
BioProject PRJNA523576
SRA SRP186478

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126772_annotated_fpkm.xls.gz 2.0 Mb (ftp)(http) XLS
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Raw data are available in SRA
Processed data are available on Series record

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