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Series GSE126962 Query DataSets for GSE126962
Status Public on Apr 01, 2019
Title Circadian transcriptome in mouse skeletal muscle after exercise in the early rest versus active phase
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We performed the circadian transcriptome analysis using the skeletal muscle from sedentary and exercised mice either in the early rest phase (ZT3) or in the early active phase (ZT15). By the combination with circadian transcriptomic and metabolomic analysis, we revealed time-of-day-dependent remodeling of circadian muscular metabolic pathways involved in glucose and glycerol metabolism after exercise. We found that only exercise in the early active phase elevates the levels of genes encoding glycolytic enzymes followed by the activation of fatty acid oxidation, branched-chain amino acid catabolism and ketogenesis/ketosis. This study demonstrates that time-of-day is a critical factor to modulate the impact of exercise on metabolic pathways within skeletal muscle.
 
Overall design Skeletal muscles from sedentary (sham-exercise) mice and mice subjected to acute treadmill exercise either in the early rest phase (ZT3) or in the early active phase (ZT15) were harvested after 0, 4, 8, 12, 16, and 20 hours after exercise or sham-exercise treatment.
 
Contributor(s) Sassone-Corsi P, Sato S
Citation(s) 31006592
Submission date Feb 22, 2019
Last update date Jul 01, 2019
Contact name Shogo Sato
E-mail(s) shogo.sato@bio.tamu.edu
Organization name Texas A&M University
Department Biology
Street address 3258 TAMU, Biological Science Building West (BSBW) 309
City College Station
State/province Texas
ZIP/Postal code 77843-3258
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (140)
GSM3618886 Rest Phase_Exercise_ZT4_rep1
GSM3618887 Rest Phase_Sedentary_ZT4_rep1
GSM3618888 Rest Phase_Exercise_ZT4_rep2
Relations
BioProject PRJNA523847
SRA SRP186637

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126962_RAW.tar 12.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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