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| Status |
Public on Feb 21, 2009 |
| Title |
Gene expression analysis of Drosophila melanogaster S2 cells after RNAi-mediated depletion of the insulator factor CTCF |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by array
|
| Summary |
We analyzed transcriptional effects after depletion of Drosophila melanogaster S2 cells from CTCF via specific dsRNA treatment in comparison to cells treated with control dsRNA.
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| |
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| Overall design |
Drosohila melanogaster S2 cells were treated with either CTCF-specific dsRNA or control dsRNA corresponding to the firefly luciferase gene. Four independent replicates were performed.
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| |
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| Contributor(s) |
Bartkuhn M, Renkawitz R |
| Citation(s) |
19229299 |
| Submission date |
Sep 10, 2008 |
| Last update date |
Mar 20, 2012 |
| Contact name |
Marek Bartkuhn |
| E-mail(s) |
marek.bartkuhn@gen.bio.uni-giessen.de
|
| Organization name |
Justus-Liebig-University Giessen
|
| Department |
Biomedical Informatics and Systems Medicine
|
| Street address |
Aulweg 132
|
| City |
Giessen |
| State/province |
Hessen |
| ZIP/Postal code |
35392 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL5016 |
FL002 - INDAC Drosophila melanogaster 14.5K long oligo array |
|
| Samples (4)
|
| GSM319253 |
S2 cells CTCF RNAi versus control RNAi treatment replicate 1 |
| GSM319254 |
S2 cells CTCF RNAi versus control RNAi treatment replicate 2 |
| GSM319255 |
S2 cells CTCF RNAi versus control RNAi treatment replicate 3 |
| GSM319256 |
S2 cells CTCF RNAi versus control RNAi treatment replicate 4 |
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| This SubSeries is part of SuperSeries: |
| GSE12765 |
Genome-wide binding of the insulator factors CTCF and CP190 |
|
| Relations |
| BioProject |
PRJNA114127 |
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