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Series GSE127777 Query DataSets for GSE127777
Status Public on Feb 27, 2022
Title Whole transcriptome bisufilte sequencing for multiple species [Xenopus laevis]
Organism Xenopus laevis
Experiment type Methylation profiling by high throughput sequencing
Summary We applied a robust experimental and computational framework to identify mRNA m5C sites with high specificity in multiple species.
 
Overall design RNA BS-seq of mRNA for multiple species.
 
Contributor(s) Huang T, Zhao T, Chen W, Zhao X, Liu J, Zhang R
Citation(s) 35513466
Submission date Mar 04, 2019
Last update date May 11, 2022
Contact name Rui Zhang
E-mail(s) zhangrui3@mail.sysu.edu.cn
Organization name Sun Yat-sen University
Street address No. 135, Xingang Xi Road
City Guangzhou
ZIP/Postal code 510275
Country China
 
Platforms (1)
GPL22393 Illumina HiSeq 4000 (Xenopus laevis)
Samples (4)
GSM3638649 XL stage0 rep1
GSM3638650 XL stage0 rep2
GSM3638651 XT stage25 rep1
This SubSeries is part of SuperSeries:
GSE127780 Whole transcriptome bisufilte sequencing for multiple species
Relations
BioProject PRJNA525394
SRA SRP187413

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE127777_XL_stage_0.csv.gz 350.2 Kb (ftp)(http) CSV
GSE127777_XL_stage_25.csv.gz 1.4 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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