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Status |
Public on Jan 01, 2016 |
Title |
Identification and fine mapping of a novel, recurrent deletion in osteosarcoma |
Organism |
Homo sapiens |
Experiment type |
Genome variation profiling by array
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Summary |
A custom high-density oligonucleotide array CGH (HD aCGH) was designed to facilitate the accurate mapping of the boundaries of the recurrent breakpoint at 3q13.31in 8 osteosarcoma tumors and cell lines
Keywords: Genetic analysis by HD aCGH
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Overall design |
8 cell lines and 8 tumor specimens
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Contributor(s) |
Scrimieri F, Zhu J, Meltzer PS |
Citation missing |
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Submission date |
Sep 15, 2008 |
Last update date |
Jan 01, 2016 |
Contact name |
Yuelin Jack Zhu |
E-mail(s) |
zhujack@mail.nih.gov
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Phone |
(240)760-7439
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Organization name |
NCI
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Department |
Genetics Branch, Center for Cancer Research
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Lab |
Dr. Paul Meltzer's Lab
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Street address |
9000 Rockville Pike
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City |
Bethesda |
State/province |
MD |
ZIP/Postal code |
20892 |
Country |
USA |
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Platforms (1) |
GPL7312 |
Custom Agilent Homo sapiens 4x44k aCGH containing 34,966 HD probes covering LSAMP |
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Samples (16)
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GSM320765 |
Osteosarcoma cell line - NY (HD aCGH) |
GSM320766 |
Osteosarcoma cell line - HUO9 (HD aCGH) |
GSM320767 |
Osteosarcoma cell line - HUO3N1 (HD aCGH) |
GSM320768 |
Osteosarcoma cell line - CAL72 (HD aCGH) |
GSM320769 |
Osteosarcoma cell line - HOS (HD aCGH) |
GSM320770 |
Osteosarcoma cell line - MG63 (HD aCGH) |
GSM320771 |
Osteosarcoma cell line - 143B (HD aCGH) |
GSM320772 |
Osteosarcoma cell line - G292 (HD aCGH) |
GSM320773 |
Osteosarcoma tumor - 20490 (HD aCGH) |
GSM320774 |
Osteosarcoma tumor - 22900 (HD aCGH) |
GSM320775 |
Osteosarcoma tumor - 25044 (HD aCGH) |
GSM320776 |
Osteosarcoma tumor - 25384 (HD aCGH) |
GSM320777 |
Osteosarcoma tumor - 25517 (HD aCGH) |
GSM320778 |
Osteosarcoma tumor - 24949 (HD aCGH) |
GSM320779 |
Osteosarcoma tumor - 22164 (HD aCGH) |
GSM320780 |
Osteosarcoma tumor - 25491 (HD aCGH) |
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This SubSeries is part of SuperSeries: |
GSE12805 |
Osteosarcoma (expression, HD aCGH, aCGH) |
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Relations |
BioProject |
PRJNA114149 |