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| Status |
Public on Mar 14, 2019 |
| Title |
rnadapt-Non-coding RNAs in the adaptation of root growth to phosphate starvation |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
ngs2013_14_rnadapt-rnadapt-Identification of new elements (non-coding-RNA) controlling root growth in response to phosphate.-Plants (Columbia er 105, or Landsberg erecta) were grown one week on media with Phosphate (+P) and then transfered on media with (+P) or without (-P = P starvation) for 1h or 2h. Root apices were harvested and total RNA extracted for RNA sequencing.
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| Overall design |
18 samples with 3 biological replicats. dose response,ecotype comparison,time course
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| Web link |
http://tools.ips2.u-psud.fr/CATdb
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| |
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| Contributor(s) |
Balzergue C, Gabriel M, Taconnat L, Balzergue S, Blein T |
| Citation(s) |
32404413 |
| |
| Submission date |
Mar 13, 2019 |
| Last update date |
May 20, 2020 |
| Contact name |
Thomas Blein |
| E-mail(s) |
thomas.blein@cnrs.fr
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| Organization name |
CNRS
|
| Lab |
IPS2
|
| Street address |
Avenue des Sciences
|
| City |
Gif-sur-Yvette |
| ZIP/Postal code |
91190 |
| Country |
France |
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| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
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| Samples (18)
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| Relations |
| BioProject |
PRJNA526886 |
| SRA |
SRP188346 |
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