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Status |
Public on Sep 25, 2020 |
Title |
ATAC-seq for MDCKII 3D and 2D epithelial morphogenesis |
Organism |
Canis lupus familiaris |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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Summary |
We performed ATAC-seq experiments for MDCKII 3D cells, confluent 2D cells as well as seeding day0 cells to study if transcriptome changes during epithelial morphogenesis is associated with chromatin changes.
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Overall design |
Examination of open chromatin during epithelial morphogenesis in MDCKII cells.
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Contributor(s) |
Zhao S, Wang T |
Citation(s) |
33089114 |
Submission date |
Apr 15, 2019 |
Last update date |
Oct 27, 2020 |
Contact name |
Shaying Zhao |
E-mail(s) |
szhao@uga.edu
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Organization name |
University of Georgia
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Lab |
Shaying Zhao
|
Street address |
B304B Life Sciences, 120 Green Street
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City |
ATHENS |
State/province |
GA |
ZIP/Postal code |
30602 |
Country |
USA |
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Platforms (1) |
GPL21400 |
Illumina NextSeq 500 (Canis lupus familiaris) |
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Samples (7)
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This SubSeries is part of SuperSeries: |
GSE129824 |
ATAC-seq and RNA-seq for MDCKII 3D and 2D epithelial morphogenesis |
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Relations |
BioProject |
PRJNA532907 |
SRA |
SRP192606 |