|
| Status |
Public on Apr 15, 2022 |
| Title |
RIP-Chip of RIN from 0-3 hour Drosophila melanogaster embryos |
| Organism |
Drosophila melanogaster |
| Experiment type |
Other
|
| Summary |
RIN-associated mRNAs were identified in early Drosophila embryos by RNA co-immunoprecipitation of the endogenous protein using a synthetic antibody (anti-RIN D072), followed by microarray analysis (RIP-Chip).
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| |
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| Overall design |
Six RNA co-immunoprecipitations were performed. This includes 3 biological replicates of anti-RIN (antibody D072) RNA co-immunoprecipitations from wild-type 0-3 hour embryos, and corresponding control antibody (antibody C1) RNA co-immunoprecipitations.
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| |
|
| Contributor(s) |
Laver JD, Westwood JT, Sidhu SS, Smibert CA, Lipshitz HD |
| Citation(s) |
32160542 |
| |
| Submission date |
Apr 16, 2019 |
| Last update date |
Jul 15, 2022 |
| Contact name |
Howard D Lipshitz |
| E-mail(s) |
howard.lipshitz@utoronto.ca
|
| Organization name |
University of Toronto
|
| Department |
Molecular Genetics
|
| Street address |
1 King's College Circle
|
| City |
Toronto |
| State/province |
ON |
| ZIP/Postal code |
M5S1A8 |
| Country |
Canada |
| |
|
| Platforms (1) |
| GPL10539 |
CDMC Nimblegen Drosophila 17K v1 |
|
| Samples (6)
|
| GSM3724774 |
Drosophila_melanogaster_anti-RIN_RIP_RNA_rep1 |
| GSM3724775 |
Drosophila_melanogaster_anti-RIN_RIP_RNA_rep2 |
| GSM3724776 |
Drosophila_melanogaster_anti-RIN_RIP_RNA_rep3 |
| GSM3724777 |
Drosophila_melanogaster_control_RIP_RNA_rep1 |
| GSM3724778 |
Drosophila_melanogaster_control_RIP_RNA_rep2 |
| GSM3724779 |
Drosophila_melanogaster_control_RIP_RNA_rep3 |
|
| Relations |
| BioProject |
PRJNA533111 |
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