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Series GSE129995 Query DataSets for GSE129995
Status Public on Apr 18, 2019
Title microRNA expression profile in retina and choroid in oxygen-induced retinopathy model
Organism Rattus norvegicus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Using Next Generation Sequencing (NGS) we profiled miRNA expression in the retina and choroid during degenerative and NV phases of oxygen-induced retinopathy (OIR).
 
Overall design Examination of 12 different samples (6 choroid and 6 retina) to compare the expression of miRNA in the normoxic vs hyperoxic (OIR) condition. Sample are a pool of 5 retina or choroid.
 
Contributor(s) Desjarlais M, Chemtob S
Citation(s) 31188886
Submission date Apr 17, 2019
Last update date Aug 10, 2019
Contact name michel desjarlais
E-mail(s) micheldesjarlais@gmail.com
Organization name Maisonneuve-Rosemont Hospital Research Center, University of Montréal, Montréal, Québec, Canada.
Department Department of Ophthalmology,
Lab Dr sylvain Chemtob
Street address 5415 Blvd L’Assomption
City montreal
State/province quebec
ZIP/Postal code H1T 2M4
Country Canada
 
Platforms (1)
GPL20084 Illumina NextSeq 500 (Rattus norvegicus)
Samples (12)
GSM3729056 choroid_p14_CTL
GSM3729057 choroid_p14_ROI
GSM3729058 choroid_p17_CTL
Relations
BioProject PRJNA533461
SRA SRP192915

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE129995_RAW.tar 1.4 Mb (http)(custom) TAR (of XLSX)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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