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Series GSE130003 Query DataSets for GSE130003
Status Public on Jan 13, 2020
Title Gastric squamous-columnar junction contains a large pool of cancer-prone immature osteopontin responsive Lgr5-CD44+ cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report the gene expression profiles of gastric squamous-columnar junction cancer derived from the mice with conditionally inactivation of Trp53 and Rb1 genes in Lgr5+ cells
 
Overall design Examination of gene expression profiles between 5 cancer samples and 3 normal control tissues
 
Contributor(s) Nikitin AY, Fu D
Citation(s) 31901081
Submission date Apr 18, 2019
Last update date Jan 13, 2020
Contact name Alexander Yu. Nikitin
E-mail(s) an58@cornell.edu
Organization name Cornell Universty
Street address 618 Tower Road T6 018A VRT
City Ithaca
State/province NY
ZIP/Postal code 14853
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (8)
GSM3729195 Cancer_1
GSM3729196 Cancer_2
GSM3729197 Cancer_3
Relations
BioProject PRJNA533540
SRA SRP192953

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130003_RNA-Seq_FPKM.txt.gz 705.9 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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