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Series GSE130023 Query DataSets for GSE130023
Status Public on Feb 14, 2020
Title Single cell RNA-Seq of Ewing Sarcoma PDX data (PDX_C1)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We report the application of single-molecule-based sequencing technology for high-throughput profiling of 3 Ewing Sarcoma PDX (PDX-83, 84 and 111) with the Fluidigm C1 technology.
 
Overall design Study of transcriptomic heterogeneity of Ewing Sarcoma models and comparison with control cell models. Raw data not submitted due to patient privacy concerns.
 
Contributor(s) Aynaud MM, Mirabeau O, Gruel N, Grossetête S, Delattre O, Zinovyev A
Citation(s) 32049009
Submission date Apr 18, 2019
Last update date Feb 14, 2020
Contact name Olivier Delattre
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (142)
GSM3730172 Ewing Sarcoma PDX-83: A472U295
GSM3730173 Ewing Sarcoma PDX-83: A472U296
GSM3730174 Ewing Sarcoma PDX-83: A472U297
This SubSeries is part of SuperSeries:
GSE130025 Transcriptional programs define intratumoral heterogeneity of Ewing sarcoma at single cell resolution
Relations
BioProject PRJNA533608

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130023_RAW.tar 22.3 Mb (http)(custom) TAR (of TXT)
GSE130023_pdx.c1.count.table.txt.gz 1.9 Mb (ftp)(http) TXT
Raw data not provided for this record
Processed data are available on Series record
Processed data provided as supplementary file
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