|
| Status |
Public on Apr 30, 2019 |
| Title |
DNA methylation from a Type I restriction modification system influences gene expression and virulence in Streptococcus pyogenes [RNA-seq] |
| Organism |
Streptococcus pyogenes |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We used Illumina NGS to measure mRNA levels and perform subsequent differential expression analysis between wild type and RM system deficient strains of Streptococcus pyogenes
|
| |
|
| Overall design |
Examination of mRNA levels across wild type and an RM system deficient strain of Streptococcus pyogenes
|
| |
|
| Contributor(s) |
Nye TM, Simmons LA, Watson ME Jr |
| Citation(s) |
31206562 |
| |
| Submission date |
Apr 29, 2019 |
| Last update date |
Jul 16, 2019 |
| Contact name |
Taylor Nye |
| E-mail(s) |
tnye@umich.edu
|
| Organization name |
University of Michigan
|
| Department |
MCDB
|
| Lab |
Simmons Lab
|
| Street address |
1105 N University Ave
|
| City |
Ann Arbor |
| ZIP/Postal code |
48109 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL24912 |
Illumina HiSeq 4000 (Streptococcus pyogenes) |
|
| Samples (6)
|
|
| This SubSeries is part of SuperSeries: |
| GSE130429 |
DNA methylation from a Type I restriction modification system influences gene expression and virulence in Streptococcus pyogenes |
|
| Relations |
| BioProject |
PRJNA540245 |
| SRA |
SRP194122 |
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