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Series GSE130676 Query DataSets for GSE130676
Status Public on May 31, 2021
Title Analysis of PHF12/SUDS3 functions within HEK293T cells.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Transcription products influenced by decreased PHF12 or SUDS3 are analyzed and compared.
 
Overall design HEK293T cells were transfected with control siRNA, siRNA targeting PHF12, or siRNA targeting SUDS3. Total RNA was isolated from cells for RNA-seq analysis.
 
Contributor(s) Adams MK, Hattem GL, Washburn MP
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Submission date May 03, 2019
Last update date May 31, 2021
Contact name Gaye L Hattem
Organization name Stowers Institute
Department Proteomics
Street address 1000 E. 50th Street
City Kansas City
State/province Missouri
ZIP/Postal code 64110
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (9)
GSM3747547 Control replicate 1 (PHF12/SUDS3 control)
GSM3747548 Control replicate 2 (PHF12/SUDS3 control)
GSM3747549 Control replicate 3 (PHF12/SUDS3 control)
Relations
BioProject PRJNA540963
SRA SRP194754

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130676_PHF12_SUDS3_TPM.csv.gz 830.1 Kb (ftp)(http) CSV
GSE130676_PHF12_SUDS3_count.csv.gz 488.4 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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