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Series GSE130820 Query DataSets for GSE130820
Status Public on Sep 20, 2019
Title The zinc-responsive repressor Loz1 is the master regulator of zinc homeostasis in Schizosaccharomyces pombe [ChIP-seq]
Organism Schizosaccharomyces pombe
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq to determine if the DNA binding activity of Loz1 is dependent upon zinc.
 
Overall design Four independent replicates of the examination of Loz1-associated sites in the genome in response to growth in media with or without zinc suplementation.
Web link https://onlinelibrary.wiley.com/doi/abs/10.1111/mmi.14384
 
Contributor(s) Wilson S, Bird AJ
Citation(s) 31515876
Submission date May 07, 2019
Last update date Sep 22, 2019
Contact name Stevin Wilson
E-mail(s) wilson.3273@osu.edu
Organization name The Ohio State University
Department Molecular Genetics
Street address 1787 Neil Ave, 063
City Columbus
State/province Ohio
ZIP/Postal code 43210
Country USA
 
Platforms (1)
GPL25575 Illumina MiniSeq (Schizosaccharomyces pombe)
Samples (12)
GSM3754736 pTATA-loz1GFP_PlusZn_repeat1
GSM3754737 pTATA-loz1GFP_PlusZn_repeat2
GSM3754738 pTATA-loz1GFP_PlusZn_repeat3
This SubSeries is part of SuperSeries:
GSE130846 The zinc-responsive repressor Loz1 is the master regulator of zinc homeostasis in Schizosaccharomyces pombe
Relations
BioProject PRJNA541519
SRA SRP195808

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130820_RAW.tar 425.6 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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