|
| Status |
Public on Dec 31, 2019 |
| Title |
Capture-C analysis of RCC-susceptibility loci in 786O renal cancer cell line |
| Organism |
Homo sapiens |
| Experiment type |
Other
|
| Summary |
Analysis of chromatin looping identies gene promoters that interact with enhancers and HIF-binding sites at kidney cancer-associated susceptibility loci
|
| |
|
| Overall design |
We utilised Capture-C to study chromatin looping from enhancers and HIF binding sites that overlap kidney cancer-associated polymorphisms identifed in a meta-analysis of kidney cancer GWAS
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| |
|
| Contributor(s) |
Mole DR, Lafleur V |
| Citation(s) |
31822727 |
| |
| Submission date |
May 09, 2019 |
| Last update date |
Dec 31, 2019 |
| Contact name |
David Robert Mole |
| E-mail(s) |
david.mole@ndm.ox.ac.uk
|
| Phone |
0044 (0)1865 613956
|
| Organization name |
University of Oxford
|
| Department |
Nuffield Department of Medicine
|
| Lab |
NDM Research Building
|
| Street address |
Roosevelt Drive, Headington
|
| City |
Oxford |
| ZIP/Postal code |
OX3 7FZ |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL20301 |
Illumina HiSeq 4000 (Homo sapiens) |
|
| Samples (2) |
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| This SubSeries is part of SuperSeries: |
| GSE130990 |
Co-incidence of RCC-susceptibility polymorphisms with HIF cis-acting sequences supports a pathway tuning model of cancer |
|
| Relations |
| BioProject |
PRJNA542175 |
| SRA |
SRP197387 |
