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Series GSE131024 Query DataSets for GSE131024
Status Public on Feb 09, 2020
Title Transcriptomic profile of bpm2,3,5 triple mutant and Col-0
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary The Jasmonate pathway regulators MYC2, MYC3 and MYC4 are central nodes in plant signaling networks integrating environmental and developmental signals to fine-tune jasmonate defenses and plant growth. Hence, their activity needs to be tightly regulated in order to optimize plant fitness. Among the increasing number of mechanisms regulating MYCs activity, protein stability is arising as a major player. However, how the levels of MYCs proteins are modulated is still poorly understood. Here, we report that MYC2, MYC3 and MYC4 are targets of BPM proteins, which act as substrate adaptors of CUL3-based E3 ubiquitin ligases. Reduction-of-function of CUL3BPM in amiR-bpm lines, bpm235 triple mutants and cul3ab double mutants enhances MYC2 and MYC3 stability and accumulation, and potentiates plant responses to JA such as root-growth inhibition, and MYC-regulated gene expression. BPM3 protein is stabilized by JA, suggesting a new negative feed-back regulatory mechanism to control MYCs activity. Our results uncover a new layer for JA-pathway regulation by CUL3BPM–mediated degradation of MYC TFs.
 
Overall design Comparison of gene expression of bpm2,3,5 triple mutant versus Col-0
 
Contributor(s) Chico JM, Fernandez-Barbero G, García-Casado G, Franco-Zorrilla JM, Solano R
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Submission date May 10, 2019
Last update date Feb 19, 2020
Contact name Jose M. Franco-Zorrilla
Organization name Centro Nacinal de Biotecnologia-CSIC
Department Plant Molecular Genetics
Street address Darwin, 3
City Madrid
State/province Madrid
ZIP/Postal code 28049
Country Spain
 
Platforms (1)
GPL22511 Agilent-045560 Arabidopsis thaliana 8x60k v1_complete
Samples (8)
GSM3759938 Col-0_repl1
GSM3759939 Col-0_repl2
GSM3759940 Col-0_repl3
Relations
BioProject PRJNA542339

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE131024_RAW.tar 105.9 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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