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GEO accession:
Series GSE131128
Query DataSets for GSE131128
Status
Public on Jul 07, 2020
Title
CTCF and Cohesin link sex-biased distal regulatory elements to sex-biased gene expression in mouse liver
Organism
Mus musculus
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
32680543
NIH grant(s)
Grant ID
Grant title
Affiliation
Name
R01 DK033765
Regulation of Sex Differences in Liver Metabolism
BOSTON UNIVERSITY CHARLES RIVER CAMPUS
DAVID J WAXMAN
R56 DK033765
Regulation of sex differences in liver metabolism
BOSTON UNIVERSITY CHARLES RIVER CAMPUS
DAVID J WAXMAN
Submission date
May 13, 2019
Last update date
Jul 27, 2020
Contact name
David J. Waxman
E-mail(s)
djw@bu.edu
Organization name
Boston University
Department
Department of Biology and Bioinformatics Program
Street address
5 Cummington Mall
City
Boston
State/province
MA
ZIP/Postal code
02215
Country
USA
Platforms (2)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
GPL21103
Illumina HiSeq 4000 (Mus musculus)
Samples (43)
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GSM3756027
Female_Rad21chip_Repl1_G133_M4
GSM3756028
Female_Rad21chip_Repl2_G133_M5
GSM3756029
Female_Rad21chip_Repl3_G100_M3
GSM3756030
Female_CTCFchip_Repl1_G133_M11
GSM3756031
Female_CTCFchip_Repl2_G133_M12
GSM3756032
Female_CTCFchip_Repl3_G133_M15
GSM3756033
Female_CTCFchip_Repl4_G100_M1
GSM3756064
Male_A1bg_Repl1_G165_M3
GSM3756065
Male_A1bg_Repl2_G168_M1
GSM3756066
Male_A1bg_Repl3_G169_M1
GSM3756067
Female_A1bg_Repl1_G165_M4
GSM3756068
Female_A1bg_Repl2_G168_M2
GSM3756069
Female_A1bg_Repl3_G169_M2
GSM3756070
Male_C9_Repl1_G165_M3
GSM3756071
Male_C9_Repl2_G168_M1
GSM3756072
Male_C9_Repl3_G169_M1
GSM3756073
Female_C9_Repl1_G165_M4
GSM3756074
Female_C9_Repl2_G168_M2
GSM3756075
Female_C9_Repl3_G169_M2
GSM3756076
Male_Nox4e1_Repl1_G165_M3
GSM3756077
Male_Nox4e1_Repl2_G168_M1
GSM3756078
Male_Nox4e1_Repl3_G169_M1
GSM3756079
Female_Nox4e1_Repl1_G165_M4
GSM3756080
Female_Nox4e1_Repl2_G168_M2
GSM3756081
Female_Nox4e1_Repl3_G169_M2
GSM3756082
Male_Nox4e2_Repl1_G165_M3
GSM3756083
Male_Nox4e2_Repl2_G168_M1
GSM3756084
Male_Nox4e2_Repl3_G169_M1
GSM3756085
Female_Nox4e2_Repl1_G165_M4
GSM3756086
Female_Nox4e2_Repl2_G168_M2
GSM3756087
Female_Nox4e2_Repl3_G169_M2
GSM3756088
Male_Nudt7_Repl1_G165_M3
GSM3756089
Male_Nudt7_Repl2_G168_M1
GSM3756090
Male_Nudt7_Repl3_G169_M1
GSM3756091
Female_Nudt7_Repl1_G165_M4
GSM3756092
Female_Nudt7_Repl2_G168_M2
GSM3756093
Female_Nudt7_Repl3_G169_M2
GSM3756094
Male_Sult3a2_Repl1_G146_M35
GSM3756095
Male_Sult3a2_Repl2_G145_M36
GSM3756096
Male_Sult3a2_Repl3_G145_M37
GSM3756097
Female_Sult3a2_Repl1_G145_M38
GSM3756098
Female_Sult3a2_Repl2_G146_M33
GSM3756099
Female_Sult3a2_Repl3_G146_M34
This SuperSeries is composed of the following SubSeries:
GSE130908
CTCF and Cohesin (Rad21) ChIP-seq in female mouse liver
GSE130911
4C-seq analysis of interactions with promoters and enhancers nearby five sex-specific genes, in male and female mouse liver
Relations
BioProject
PRJNA542689
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
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TXT
Supplementary data files not provided
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