|
| Status |
Public on Jan 01, 2020 |
| Title |
RIP_seq data for Rrp6 project analysis in malaria (Plasmodium falciparum) |
| Organism |
Plasmodium falciparum |
| Experiment type |
Other
|
| Summary |
We carried out RNA Immunoprecipitation followed by deep sequencing (RIP-seq) to explore the difference of direct target substrates of PfRrp6 and RNA exosome core
|
| |
|
| Overall design |
We carried out RIP-seq assay to detect specific recognition of Rrp6 by PfRrp6 line with PfRrp4 and GFP as control
|
| |
|
| Contributor(s) |
Shen S, Fan Y, Wei G, Jiang C, Zhang Q |
| Citation(s) |
32487761 |
| Submission date |
Jun 24, 2019 |
| Last update date |
Jun 16, 2020 |
| Contact name |
Shijun Shen |
| E-mail(s) |
xiaoshen19930901@163.com
|
| Phone |
+86-21-13795384821
|
| Organization name |
Tongji University
|
| Department |
Bioninformatics
|
| Lab |
Jiang Lab
|
| Street address |
1239 Siping Road, Shanghai, P.R. China
|
| City |
Shanghai |
| State/province |
Shanghai |
| ZIP/Postal code |
200092 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL26835 |
HiSeq X Ten (Plasmodium falciparum) |
|
| Samples (20)
|
|
| This SubSeries is part of SuperSeries: |
| GSE133241 |
Rrp6-mediated heterochromatin surveillance secures antigenic variation and sexual commitment of human malaria parasites |
|
| Relations |
| BioProject |
PRJNA550430 |
| SRA |
SRP211864 |
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