 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Jan 23, 2022 |
| Title |
microRNA (miRNA) expression data from renal cysts of autosomal dominant polycystic kidney disease (ADPKD) patients |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by array
|
| Summary |
To elucidate the systems biology of miRNAs in human PKD1 renal cyst growth
|
| |
|
| Overall design |
We performed global miRNA profiling on 16 renal cysts of different size (small cysts: less than 1 ml, n=5; small cysts*: between 1-5 ml, n=5 (including 1 replicate); medium cysts: between 10-25 ml, n=4 (including 1 replicate); large cysts: greater than 50 ml, n=4) and minimally cystic tissue (MCT, n=7, including 1 replicate) from four PKD1 polycystic kidneys. Additionally, non-cancerous renal cortical tissue from three nephrectomized kidneys with isolated renal cell carcinoma was used as normal control tissue (n=4)
|
| |
|
| Contributor(s) |
Pei Y, Song X |
| Citation(s) |
32622528 |
| |
| Submission date |
Jun 28, 2019 |
| Last update date |
Jan 25, 2022 |
| Contact name |
York PC Pei |
| E-mail(s) |
york.pei@uhn.ca
|
| Phone |
416-340-4257
|
| Organization name |
University of Toronto
|
| Department |
Department of Medicine
|
| Street address |
8N838, 585 University Avenue
|
| City |
Toronto |
| State/province |
Ontario |
| ZIP/Postal code |
M5G2N2 |
| Country |
Canada |
| |
|
| Platforms (1) |
| GPL8179 |
Illumina Human v2 MicroRNA expression beadchip |
|
| Samples (29)
|
| GSM3911346 |
PKD1 renal cyst, small cyst_4, < 1ml |
| GSM3911347 |
PKD1 renal cyst, small cyst_5, < 1ml |
| GSM3911348 |
PKD1 renal cyst, small cyst_6*, 3 ml |
| GSM3911349 |
PKD1 renal cyst, small cyst_7*, 1.5 ml |
| GSM3911350 |
PKD1 renal cyst, small cyst_8*, 3 ml |
| GSM3911351 |
PKD1 renal cyst, small cyst_8*, 3 ml, replicate |
| GSM3911352 |
PKD1 renal cyst, small cyst_9*, 5 ml |
| GSM3911353 |
PKD1 renal cyst, medium cyst_1, 25 ml |
| GSM3911354 |
PKD1 renal cyst, medium cyst_2, 30 ml |
| GSM3911355 |
PKD1 renal cyst, medium cyst_3, 20 ml |
| GSM3911356 |
PKD1 renal cyst, medium cyst_3, 20 ml, replicate |
| GSM3911357 |
PKD1 renal cyst, medium cyst_5, 50 ml |
| GSM3911358 |
PKD1 renal cyst, large cyst_1, 100 ml |
| GSM3911359 |
PKD1 renal cyst, large cyst_2, 60 ml |
| GSM3911360 |
PKD1 renal cyst, large cyst_3, 50 ml |
| GSM3911361 |
minimally cystic tissue_1 |
| GSM3911362 |
minimally cystic tissue_2 |
| GSM3911363 |
minimally cystic tissue_2, replicate |
| GSM3911364 |
minimally cystic tissue_3 |
| GSM3911365 |
minimally cystic tissue_4 |
| GSM3911366 |
minimally cystic tissue_5 |
| GSM3911367 |
minimally cystic tissue_6 |
| GSM3911368 |
normal renal cortical tissue_1 |
| GSM3911369 |
normal renal cortical tissue_2 |
| GSM3911370 |
normal renal cortical tissue_3 |
| GSM3911371 |
normal renal cortical tissue_4 |
|
| Relations |
| BioProject |
PRJNA551693 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE133530_Non-normalized_data.txt.gz |
131.4 Kb |
(ftp)(http) |
TXT |
| GSE133530_RAW.tar |
70.0 Kb |
(http)(custom) |
TAR |
| Processed data included within Sample table |
|
|
|
|
 |
Less...
More...