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Series GSE133676 Query DataSets for GSE133676
Status Public on May 21, 2020
Title High-throughput sequencing of circRNAs in ovarian cancer SKOV3 cell line
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Circular RNAs(circRNAs) are conservative and stable and have been extensively studied in cancer in recent years. Expression profile of circRNA is largely unknown in ovarian cancer. This study explored circRNAs in the ovarian cancer cell line SKOV3.
 
Overall design We injected untreated SKOV3 ovarian cancer cells into nude mice peritoneal cavity to mimic the circRNAs formation and degradation during tumor cell growth. Tumor tissues with good growth were obtained from nude mice, and high-throughput sequencing was performed to obtain circRNAs stably expressed in all samples.
 
Contributor(s) Tang J, Chen L, Deng G
Citation(s) 32467669
Submission date Jul 02, 2019
Last update date Jun 01, 2020
Contact name Guanming Deng
E-mail(s) dgm1993@126.com
Organization name Hunan Cancer Hospital/the Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University
Department Gynecologic Oncology
Street address 283 Tongzipo Road, Yuelu District
City Changsha
State/province Hunan
ZIP/Postal code 410013
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (3)
GSM3914363 S1
GSM3914364 S2
GSM3914365 S3
Relations
BioProject PRJNA552216
SRA SRP212747

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Supplementary file Size Download File type/resource
GSE133676_all.counts.txt.gz 261.3 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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